Spitzer C., Reyes F. C., Buono R., Sliwinski M. K., Haas T. J., Otegui M. S. (2009) The ESCRT-related CHMP1A and B proteins mediate multivesicular body sorting of auxin carriers in Arabidopsis and are required for plant development. The Plant Cell 21: 749-766.
Bosch, J. A., Heo, K., Sliwinski, M. K., Baum, D. A. (2008) An exploration of LEAFY expression in independent evolutionary origins of rosette flowering in Brassicaceae. American Journal of Botany 95:286-293.
Sliwinski, M. K., Bosch, J. A., Yoon, H., von Baltazar, M., Baum, D. A. (2007) The role of two LEAFY paralogs from Idahoa scapigera (Brassicaceae) in the evolution of a derived plant architecture. The Plant Journal 51:211-219.
Haas, T. J., Sliwinski, M. K., Martinez, D. E., Preuss, M., Takashi, U., Nielsen, E., Odorizzi, G., Otegui, M. S. (2007) The Arabidopsis AAA ATPase SKD1 is involved in multivesicular endosome function and interacts with its positive regulator LYST-INTERACTING PROTEIN5. The Plant Cell 19:1295-1312.
Sliwinski, M. K., White, M. A., Maizel, A., Weigel, Baum, D. A. (2006) Evolutionary divergence of LFY function in the mustards Arabidopsis thaliana and Leavenworthia crassa. Plant Molecular Biology 62:279-289.
Simon, H. M., Jahn, C. E., Bergerud, L. T., Sliwinski, M. K., Weimer, P. J., Willis, D. K., and Goodman, R. M. (2005) Cultivation of mesophilic soil Crenarchaeotes in enrichment cultures from plant roots. Applied and Environmental Microbiology 71:4751-4760.
Sliwinski, M. K., Goodman, R. M. (2004) Spatial heterogeneity of crenarchaeal assemblages within mesophilic soil ecosystems as revealed by PCR-single-stranded conformation polymorphism profiling. Applied and Environmental Microbiology 70:1811-1820.
Sliwinski, M. K., Goodman, R. M. (2004) Comparison of crenarchaeal consortia inhabiting the rhizosphere of diverse terrestrial plants with those in bulk soil in native environments. Applied and Environmental Microbiology 70:1821-1826.
Paulsen, I. T., Nguyen, L., Sliwinski, M. K., Rabus, R., Saier, M. H. (2000) Microbial genome analyses: Comparative transport capabilities in eighteen prokaryotes. Journal of Molecular Biology 301:75-100.
Saier, M. H., Jr., Eng, B. H., Fard, S., Garg, J., Haggerty, D. A., Hutchinson, W. J., Jack, D. L., Lai, E. C., Nusinew, D. P., Omar, A. M., Pao, S. S., Paulsen, I. T., Quan, J. A., Sliwinski, M., Tseng, T-. T., Wachi, S., and Young, G. B. (1999) Phylogenetic characterization of novel transport protein families revealed by genome analyses. Biochimica et Biophysica Acta 1422: 1-56.
Paulsen, I. T., Sliwinski, M. K., Nelissen, B., Goffeau, A., and Saier, M. H., Jr. (1998) Unified inventory of established and putative transporters encoded within the complete genome of Saccharomyces cerevisiae. FEBS Letters 430:116-125.
Paulsen, I. T., Sliwinski, M. K., Reizer, J., and Saier, M. H., Jr. (1998) Microbial genome analyses: Global comparisons of transport capabilities based on phylogenies, bioenergetics and substrate specificities. Journal of Molecular Biology 277:573-592.
Saier, M. H., Jr., Paulsen, I. T., Sliwinski, M. K., Pao S. S., Skurray R. A., and Nikaido H. (1998) Evolutionary origins of multidrug and drug-specific efflux pumps in bacteria. FASEB Journal 12:265-274.