Heil, K.D., S.L. O'Kane, Jr., L.M. Reeves, and A. Clifford (eds.) In Press. Flora of the Four Corners Region: Vascular Plants of the San Juan River Drainage, Arizona, Colorado, New Mexico and Utah. Missouri Botanical Garden Press.
O’Kane, S.L., Jr. In press. Physaria. In Flora of North America. Vol. 7
O’Kane, S.L., Jr. In press. Paysonia. In Flora of North America. Vol 7.
O’Kane, S.L., Jr. 2007. Physaria scrotiformis (Brassicaceae), a new high-elevation species from southwestern Colorado and new combinations in Physaria. Novon 17:376-382.
O’Kane, S.L., Jr. and B. A. Grady. 2007. New species and combinations in Physaria (Brassicaceae) from western North America. Novon 17:182-192.
Beck, J.B., I.A. Al-Shehbaz, S.L. O'Kane Jr., B.A. Schaal. 2007. Further insights into the phylogeny of Arabidopsis (Brassicaceae) from nuclear Atmyb2 flanking sequence. Molecular Phylogenetics and Evolution 42: 122-130.
Bailey, C.D., M.A. Koch, M. Mayer, K. Mummenhoff, S.L.O’Kane, Jr., S.I. Warwick, M.D. Windham, and I.A. Al-Shehbaz. 2006. Toward a global phylogeny of the Brassicaceae. Molecular Biology and Evolution 23: 2142-2160.
O’Kane, S.L., Jr. 2006. Lesquerella parvula Greene (pygmy bladderpod): a technical conservation assessment. USDA Forest Service, Rocky Mountain Region. Available online at http://www.fs.fed.us/r2/projects/scp/assessments/lesquerellaparvula.pdf [peer reviewed].
O’Kane, S.L., Jr. and James A. Reveal. 2006. Physaria pulvinata (Brassicaceae), a new species from southwestern Colorado. Brittonia 58:74-77.
O’Kane, S.L., Jr. And I.A. Al-Shehbaz. 2004. The genus Physaria (Brassicaceae) in South America. Novon 14:196-204.
O’Kane, S.L., Jr. and I.A. Al-Shehbaz. 2003. Phylogenetic Position and Generic Limits of Arabidopsis (Brassicaceae) Based on Sequences of Nuclear Ribosomal DNA. Annals of the Missouri Botanical Garden 90:603-612.
Heil, K.D. and S.L. O’Kane, Jr. 2003. Catalog of the Four Corners Flora, vascular plants of the San Juan River drainage, Arizona, Colorado, New Mexico and Utah. Harvard Papers in Botany 7:321-379.
Al-Shehbaz, I.A. and S.L. O’Kane, Jr. 2002. Lesquerella is united with Physaria (Brassicaceae). Novon 12:319-329.
O’Kane, S.L., Jr. and I.A. Al-Shehbaz. 2002. Paysonia, a new genus segregated from Lesquerella (Brassicaceae). Novon 12:379-381.
Al-Shehbaz, I.A. and S.L. O’Kane, Jr. 2002. Taxonomy and phylogeny of Arabidopsis (Brassicaceae). In C.R. Somerville and E.M Meyerowitz (eds.), The Arabidopsis Book, doi/10.119/tab.001, http://www.aspb.org/publications/arabidopsis/.
Price, R.A., I.A. Al-Shehbaz and S.L. O’Kane, Jr. 2001. Beringia (Brassicaceae), a New Genus of Arabidopsoid Affinities from Russia and North America. Novon 11(3):332–336.
O’Kane, S.L., Jr. 1999. Lesquerella navajoensis (Brassicaceae), a new species of the L. hitchcockii Complex from New Mexico. Madroño 46(2):88-91.
Al-Shehbaz, I. A. and S.L. O'Kane Jr. 1999. Ianhedgea (Brassicaceae), a new generic name replacing the illegitimate Microsisymbrium. Edinburgh Journal of Botany 56:321-327.
Al-Shehbaz, I.A., S.L. O'Kane, Jr., and R.A. Price. 1999. Generic placement of species excluded from Arabidopsis (Brassicaceae). Novon 9:296-307.
O’Kane, S.L., Jr. and B.A. Schaal. 1998. Phylogenetics of Lopezia (Onagraceae): Evidence from Chloroplast DNA Restriction Sites. Systematic Botany 23:5-20.
O’Kane, S.L., Jr. and I.A. Al-Shehbaz. 1997. A synopsis of Arabidopsis (Brassicaceae). Novon 7:323-327.
O’Kane, S.L., Jr., B.A. Schaal, and I. Al-Shehbaz. 1996. The origins of Arabidopsis suecica (Brassicaceae), as indicated by nuclear rDNA. Systematic Botany 21:559-566.
O’Kane, S.L., Jr. 1995. Clone Bank and Physical Map of Lopezia miniata Lag. ex DC ssp. miniata (Onagraceae) chloroplast DNA. Biochemical Systematics and Ecology 23:507-516.
Al-Shehbaz, I. A. and S. L. O'Kane, Jr. 1995. Placement of Arabidopsis parvula in Thellungiella (Brassicaceae). Novon 5:309-310.
Schaal, B.A., S.L. O'Kane, Jr. and S.H. Rogstad. 1991. DNA Variation in Plant Populations. Trends in Ecology and Evolution. 6:329-333.
O'Kane, S.L., Jr. 1990. A New Species of Erigeron (Asteraceae: Astereae) From Colorado. Madroño 37:184-189.
O'Kane, S.L., Jr. 1988. Colorado's Rare Flora. Great Basin Naturalist 48:434-484.
O'Kane, S.L., Jr. and J.L. Anderson. 1987. Penstemon debilis (Scrophulariaceae): A New Species From Colorado Endemic to Oil Shale. Brittonia 39(4):412-416.